Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapd | VSVS05_RS01010 | Not Available | Negative | 191696 - 192436 | 28655.1 |
| dephospho-coa kinase | VSVS05_RS01015 | Not Available | Negative | 192471 - 193079 | 22737.4 |
| a24 family peptidase | VSVS05_RS01020 | Not Available | Negative | 193084 - 193953 | 32384.5 |
| type ii secretion system f family protein | VSVS05_RS01025 | Not Available | Negative | 194059 - 195282 | 45520.4 |
| type iv-a pilus assembly atpase pilb | VSVS05_RS01030 | Not Available | Negative | 195336 - 197018 | 61821.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VSVS05_RS01035 | Not Available | Negative | 197018 - 197476 | 15722.7 |
| dna mismatch repair protein muts | VSVS05_RS01040 | Not Available | Negative | 197739 - 200306 | 94821.0 |
| nicotinamide-nucleotide amidase | VSVS05_RS01045 | Not Available | Positive | 200391 - 200879 | 17127.2 |
| recombinase reca | VSVS05_RS01050 | Not Available | Positive | 201094 - 202134 | 37358.1 |
| alanine--trna ligase | VSVS05_RS01055 | Not Available | Positive | 202495 - 205077 | 93821.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



