Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein hydrolase activator nlpd | VSVS05_RS00960 | Not Available | Positive | 183082 - 184002 | 32758.9 |
| rna polymerase sigma factor rpos | VSVS05_RS00965 | Not Available | Positive | 184080 - 185063 | 37413.6 |
| hlyc/corc family transporter | VSVS05_RS00970 | Not Available | Negative | 185236 - 186510 | 47052.7 |
| inner membrane protein ypjd | VSVS05_RS00975 | Not Available | Negative | 186639 - 187433 | 29253.7 |
| signal recognition particle protein | VSVS05_RS00980 | Not Available | Positive | 187616 - 188995 | 50166.7 |
| 30s ribosomal protein s16 | VSVS05_RS00985 | Not Available | Positive | 189207 - 189455 | 9093.91 |
| ribosome maturation factor rimm | VSVS05_RS00990 | Not Available | Positive | 189480 - 190034 | 21262.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | VSVS05_RS00995 | Not Available | Positive | 190062 - 190811 | 27906.4 |
| 50s ribosomal protein l19 | VSVS05_RS01000 | Not Available | Positive | 190861 - 191214 | 13202.1 |
| dna gyrase inhibitor yacg | VSVS05_RS01005 | Not Available | Negative | 191426 - 191620 | 7185.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



