Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | VSVS05_RS00100 | Not Available | Negative | 18002 - 19954 | 71814.8 |
| 3'-5' exonuclease | VSVS05_RS00105 | Not Available | Negative | 20188 - 20820 | 24222.3 |
| duf294 nucleotidyltransferase-like domain-containing protein | VSVS05_RS00110 | Not Available | Negative | 20831 - 22657 | 69028.2 |
| 3-phenylpropionate mfs transporter | VSVS05_RS00115 | Not Available | Positive | 22864 - 24054 | 43581.8 |
| nahk/ercs family hybrid sensor histidine kinase/response regulator | VSVS05_RS00120 | Not Available | Positive | 24149 - 27580 | 126739.0 |
| hypothetical protein | VSVS05_RS00125 | Not Available | Negative | 27607 - 28095 | 17775.3 |
| sodium:solute symporter family protein | VSVS05_RS00130 | Not Available | Negative | 28247 - 29974 | 61465.6 |
| duf4212 domain-containing protein | VSVS05_RS00135 | Not Available | Negative | 29987 - 30250 | 10383.7 |
| marc family protein | VSVS05_RS00140 | Not Available | Negative | 30468 - 31094 | 22384.4 |
| response regulator transcription factor | VSVS05_RS00145 | Not Available | Negative | 31250 - 31885 | 22943.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



