Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | VSVS05_RS21525 | Not Available | Negative | 94940 - 95416 | 18471.2 |
| type vi secretion system-associated fha domain protein tagh | VSVS05_RS21530 | Not Available | Negative | 95419 - 96885 | 55232.6 |
| type vi secretion system baseplate subunit tssg | VSVS05_RS21535 | Not Available | Negative | 96888 - 97904 | 38412.1 |
| dna repair protein radc | VSVS05_RS21540 | Not Available | Negative | 97868 - 99286 | 53764.8 |
| is4 family transposase | VSVS05_RS21545 | Not Available | Negative | 99307 - 100515 | 45975.1 |
| dna repair protein radc | VSVS05_RS21550 | Not Available | Negative | 100634 - 100975 | 13332.0 |
| type vi secretion system baseplate subunit tsse | VSVS05_RS21555 | Not Available | Negative | 100981 - 101418 | 16185.5 |
| type vi secretion system contractile sheath large subunit | VSVS05_RS21560 | Not Available | Negative | 101421 - 102896 | 55932.2 |
| type vi secretion system contractile sheath small subunit | VSVS05_RS21565 | Not Available | Negative | 102907 - 103452 | 20227.4 |
| tetratricopeptide repeat protein | VSVS05_RS21570 | Not Available | Negative | 103677 - 104678 | 38539.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



