Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system ywqk family antitoxin | VSVS05_RS20775 | Not Available | Negative | 1411689 - 1413038 | 52391.1 |
| tetratricopeptide repeat protein | VSVS05_RS20780 | Not Available | Negative | 1413035 - 1414291 | 47043.7 |
| solute carrier family 23 protein | VSVS05_RS20785 | Not Available | Positive | 1414825 - 1416156 | 46605.6 |
| guanine deaminase | VSVS05_RS20790 | Not Available | Positive | 1416159 - 1417538 | 50890.4 |
| lysr family transcriptional regulator | VSVS05_RS20795 | Not Available | Negative | 1417662 - 1418483 | 30283.4 |
| glutathione s-transferase family protein | VSVS05_RS20800 | Not Available | Positive | 1418598 - 1419245 | 24540.2 |
| uxaa family hydrolase | VSVS05_RS20805 | Not Available | Positive | 1419915 - 1420244 | 11879.5 |
| uxaa family hydrolase | VSVS05_RS20810 | Not Available | Positive | 1420244 - 1421419 | 41628.1 |
| dmt family transporter | VSVS05_RS20815 | Not Available | Positive | 1421473 - 1422444 | 34167.6 |
| mandelate racemase/muconate lactonizing enzyme family protein | VSVS05_RS20820 | Not Available | Positive | 1422559 - 1423701 | 41909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



