Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | VSVS05_RS20430 | Not Available | Negative | 1345997 - 1347577 | 59940.1 |
| lipopolysaccharide assembly protein lapb | VSVS05_RS20435 | Not Available | Negative | 1347577 - 1349046 | 56966.5 |
| lactate dehydrogenase | VSVS05_RS20440 | Not Available | Negative | 1349170 - 1350642 | 56324.1 |
| purine-nucleoside phosphorylase | VSVS05_RS20445 | Not Available | Negative | 1350926 - 1351636 | 25498.8 |
| duf523 and duf1722 domain-containing protein | VSVS05_RS20450 | Not Available | Positive | 1352027 - 1352977 | 36253.0 |
| merr family transcriptional regulator | VSVS05_RS20455 | Not Available | Positive | 1352967 - 1353767 | 29217.5 |
| deoxyribodipyrimidine photo-lyase | VSVS05_RS20460 | Not Available | Positive | 1353845 - 1355296 | 56316.8 |
| l,d-transpeptidase family protein | VSVS05_RS20465 | Not Available | Positive | 1355296 - 1356210 | 33557.8 |
| yitt family protein | VSVS05_RS20470 | Not Available | Positive | 1356345 - 1356965 | 22605.6 |
| bcct family transporter | VSVS05_RS20475 | Not Available | Negative | 1357233 - 1358843 | 57802.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



