Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | VSVS05_RS20330 | Not Available | Negative | 1321581 - 1322300 | 27035.3 |
| sumf1/egtb/pvdo family nonheme iron enzyme | VSVS05_RS20335 | Not Available | Negative | 1322628 - 1324454 | 67454.9 |
| pega domain-containing protein | VSVS05_RS20340 | Not Available | Negative | 1324607 - 1325707 | 41266.4 |
| arac family transcriptional regulator | VSVS05_RS20345 | Not Available | Positive | 1326147 - 1326962 | 29920.0 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | VSVS05_RS20350 | Not Available | Positive | 1327149 - 1330277 | 114890.0 |
| 1-pyrroline-5-carboxylate dehydrogenase | VSVS05_RS20355 | Not Available | Positive | 1330292 - 1330984 | 24608.1 |
| sodium/proline symporter putp | VSVS05_RS20360 | Not Available | Positive | 1331079 - 1332569 | 53227.5 |
| hypothetical protein | VSVS05_RS20365 | Not Available | Positive | 1332747 - 1332974 | 8685.35 |
| lrp/asnc family transcriptional regulator | VSVS05_RS20370 | Not Available | Positive | 1333071 - 1333538 | 17444.2 |
| duf445 domain-containing protein | VSVS05_RS20375 | Not Available | Negative | 1333611 - 1334315 | 25849.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



