Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone pcu(a)c | VSVS05_RS20280 | Not Available | Negative | 1311373 - 1311819 | 16107.7 |
| sco family protein | VSVS05_RS20285 | Not Available | Negative | 1311832 - 1312422 | 21763.9 |
| hypothetical protein | VSVS05_RS20290 | Not Available | Negative | 1312419 - 1312844 | 15615.8 |
| gnat family n-acetyltransferase | VSVS05_RS20295 | Not Available | Negative | 1312988 - 1313521 | 20032.9 |
| duf2057 family protein | VSVS05_RS20300 | Not Available | Negative | 1313598 - 1314236 | 23353.6 |
| type i secretion system permease/atpase | VSVS05_RS20305 | Not Available | Negative | 1314470 - 1316587 | 78183.5 |
| eal domain-containing protein | VSVS05_RS20310 | Not Available | Negative | 1316608 - 1318518 | 71474.3 |
| transglutaminase-like cysteine peptidase | VSVS05_RS20315 | Not Available | Negative | 1318524 - 1319288 | 29233.2 |
| hypothetical protein | VSVS05_RS20320 | Not Available | Negative | 1319272 - 1320662 | 50509.5 |
| pyridoxamine 5'-phosphate oxidase | VSVS05_RS20325 | Not Available | Positive | 1320889 - 1321524 | 24257.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



