Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase 2 family protein | VSVS05_RS20135 | Not Available | Positive | 1280133 - 1281518 | 52448.7 |
| methylated-dna--[protein]-cysteine s-methyltransferase | VSVS05_RS20140 | Not Available | Positive | 1281515 - 1281988 | 17083.7 |
| hypothetical protein | VSVS05_RS22025 | Not Available | Negative | 1282003 - 1282182 | 6818.12 |
| dead/deah box helicase | VSVS05_RS20145 | Not Available | Negative | 1282286 - 1283485 | 44544.0 |
| hypothetical protein | VSVS05_RS20150 | Not Available | Negative | 1283673 - 1284002 | 12696.5 |
| sodium:proton antiporter nhad | VSVS05_RS20155 | Not Available | Negative | 1284144 - 1285577 | 52503.8 |
| nucleoside recognition domain-containing protein | VSVS05_RS20160 | Not Available | Positive | 1286118 - 1286843 | 25804.2 |
| yjig family protein | VSVS05_RS20165 | Not Available | Positive | 1286843 - 1287310 | 16247.8 |
| m20 family metallopeptidase | VSVS05_RS20170 | Not Available | Positive | 1287320 - 1288444 | 40384.3 |
| ykva family protein | VSVS05_RS20175 | Not Available | Positive | 1288592 - 1289020 | 15318.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



