Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | VSVS05_RS20085 | Not Available | Negative | 1269960 - 1270982 | 38375.0 |
| tetr/acrr family transcriptional regulator | VSVS05_RS20090 | Not Available | Positive | 1271196 - 1271786 | 22217.5 |
| alpha/beta fold hydrolase | VSVS05_RS20095 | Not Available | Positive | 1271942 - 1272787 | 30859.9 |
| dass family sodium-coupled anion symporter | VSVS05_RS20100 | Not Available | Positive | 1272915 - 1274303 | 49210.6 |
| hypothetical protein | VSVS05_RS20105 | Not Available | Positive | 1274556 - 1274951 | 15349.4 |
| agmatinase | VSVS05_RS20110 | Not Available | Negative | 1275018 - 1275947 | 33838.3 |
| arginine decarboxylase | VSVS05_RS20115 | Not Available | Negative | 1275948 - 1277858 | 71820.4 |
| duf413 domain-containing protein | VSVS05_RS20120 | Not Available | Negative | 1278098 - 1278454 | 13667.0 |
| lysr family transcriptional regulator | VSVS05_RS20125 | Not Available | Positive | 1278702 - 1279583 | 32807.2 |
| hypothetical protein | VSVS05_RS20130 | Not Available | Negative | 1279705 - 1279908 | 7413.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



