Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asch domain-containing protein | VSVS05_RS19830 | Not Available | Positive | 1211371 - 1211838 | 17538.5 |
| tetratricopeptide repeat protein | VSVS05_RS19835 | Not Available | Negative | 1212006 - 1213337 | 49785.6 |
| vf530 family dna-binding protein | VSVS05_RS19840 | Not Available | Positive | 1213669 - 1213884 | 8319.96 |
| efflux rnd transporter periplasmic adaptor subunit | VSVS05_RS19845 | Not Available | Positive | 1214788 - 1215930 | 40354.6 |
| efflux rnd transporter permease subunit | VSVS05_RS19850 | Not Available | Positive | 1215943 - 1219095 | 113311.0 |
| gnat family n-acetyltransferase | VSVS05_RS19855 | Not Available | Negative | 1219166 - 1219597 | 16642.0 |
| acfa family outer membrane beta-barrel protein | VSVS05_RS19860 | Not Available | Negative | 1219876 - 1220448 | 21096.9 |
| cata-like o-acetyltransferase | VSVS05_RS19865 | Not Available | Negative | 1220686 - 1221345 | 25621.6 |
| outer membrane beta-barrel protein | VSVS05_RS19870 | Not Available | Positive | 1221608 - 1222198 | 21164.9 |
| zinc ribbon domain-containing protein yjdm | VSVS05_RS19875 | Not Available | Positive | 1222387 - 1222716 | 11952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



