Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | strain VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase rpia | VSVS05_RS19680 | Not Available | Positive | 1174396 - 1175091 | 24290.4 |
| sapep family mn(2+)-dependent dipeptidase | VSVS05_RS19685 | Not Available | Positive | 1175151 - 1176557 | 52206.8 |
| pts transporter subunit eiic | VSVS05_RS19690 | Not Available | Positive | 1176561 - 1178144 | 57476.7 |
| alginate export family protein | VSVS05_RS19695 | Not Available | Positive | 1178281 - 1179696 | 53861.0 |
| amino acid permease | VSVS05_RS19700 | Not Available | Negative | 1180024 - 1181187 | 41806.5 |
| amino acid permease | VSVS05_RS19705 | Not Available | Negative | 1181416 - 1182579 | 41894.3 |
| catalase | VSVS05_RS19710 | Not Available | Positive | 1183206 - 1184636 | 54493.8 |
| nird/ygiw/ydei family stress tolerance protein | VSVS05_RS19715 | Not Available | Negative | 1184719 - 1185093 | 13236.9 |
| phosphodiester glycosidase family protein | VSVS05_RS19720 | Not Available | Positive | 1185427 - 1187004 | 55787.6 |
| transposase | VSVS05_RS19725 | Not Available | Negative | 1187333 - 1188211 | 33745.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



