Cryobacterium arcticum strain PAMC 27867

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Cryobacterium

Description

Cryobacterium arcticum strain PAMC 27867 is a Gram-positive bacterium characterized by its rod shape. This strain is notable for possessing three replicons, which are essential for its genetic stability and adaptability. The accessions for this strain are recorded in the National Center for Biotechnology Information (NCBI) under the identifiers NZ_CP016283.1, NZ_CP016282.1, and NZ_CP016284.1, which provide valuable genomic data for researchers. The Gram-positive nature of Cryobacterium arcticum suggests a thicker peptidoglycan layer in its cell wall compared to Gram-negative bacteria, which may contribute to its resilience in cold environments. This resilience is particularly significant given the strain's origin in Arctic conditions, where temperature and nutrient availability can be extreme. The presence of three replicons indicates a complex genomic structure that may allow for enhanced metabolic capabilities and adaptability, potentially enabling the bacterium to thrive in nutrient-limited and harsh environments typical of its habitat. This could also suggest an evolutionary advantage, allowing the strain to respond effectively to environmental changes. From a biological and ecological perspective, the study of Cryobacterium arcticum strain PAMC 27867 can provide insights into the microbial diversity of polar ecosystems. Understanding the genomic features and ecological roles of such microorganisms can aid in comprehending how life persists in extreme conditions and the potential implications for biogeochemical cycles in Arctic regions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCryobacterium
SpeciesCryobacterium arcticum
Strainstrain PAMC 27867

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cryobacterium arcticum strain PAMC 27867 chromosome 1, complete

Gene Summary

Adenine Count

654366 bp

Thymine Count

656411 bp

Guanine Count

1433580 bp

Cytosine Count

1430144 bp

Genome Length

4174501 bp

Protein-coding Genes

3797 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome small subunit-dependent gtpase aPA27867_RS03495Not AvailableNegative799160 - 80022438051.0
3-phosphoshikimate 1-carboxyvinyltransferasePA27867_RS03500Not AvailableNegative800221 - 80158246717.4
sigma-70 family rna polymerase sigma factorPA27867_RS03505Not AvailablePositive801756 - 80237322975.0
zf-hc2 domain-containing proteinPA27867_RS03510Not AvailablePositive802370 - 8026129285.95
hypothetical proteinPA27867_RS03515Not AvailableNegative802640 - 80296911349.3
asp23/gls24 family envelope stress response proteinPA27867_RS03520Not AvailablePositive803287 - 80374215202.8
glsb/yeaq/ymge family stress response membrane proteinPA27867_RS03525Not AvailablePositive803846 - 8041099062.64
mmpl family transporterPA27867_RS03530Not AvailablePositive804251 - 80647376846.9
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunitPA27867_RS03535Not AvailableNegative806547 - 810356138751.0
guab1 family imp dehydrogenase-related proteinPA27867_RS03540Not AvailablePositive810491 - 81193049939.8

Displaying genes 771 – 780 of 4073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.