Cryobacterium arcticum strain PAMC 27867

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Cryobacterium

Description

Cryobacterium arcticum strain PAMC 27867 is a Gram-positive bacterium characterized by its rod shape. This strain is notable for possessing three replicons, which are essential for its genetic stability and adaptability. The accessions for this strain are recorded in the National Center for Biotechnology Information (NCBI) under the identifiers NZ_CP016283.1, NZ_CP016282.1, and NZ_CP016284.1, which provide valuable genomic data for researchers. The Gram-positive nature of Cryobacterium arcticum suggests a thicker peptidoglycan layer in its cell wall compared to Gram-negative bacteria, which may contribute to its resilience in cold environments. This resilience is particularly significant given the strain's origin in Arctic conditions, where temperature and nutrient availability can be extreme. The presence of three replicons indicates a complex genomic structure that may allow for enhanced metabolic capabilities and adaptability, potentially enabling the bacterium to thrive in nutrient-limited and harsh environments typical of its habitat. This could also suggest an evolutionary advantage, allowing the strain to respond effectively to environmental changes. From a biological and ecological perspective, the study of Cryobacterium arcticum strain PAMC 27867 can provide insights into the microbial diversity of polar ecosystems. Understanding the genomic features and ecological roles of such microorganisms can aid in comprehending how life persists in extreme conditions and the potential implications for biogeochemical cycles in Arctic regions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCryobacterium
SpeciesCryobacterium arcticum
Strainstrain PAMC 27867

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cryobacterium arcticum strain PAMC 27867 chromosome 1, complete

Gene Summary

Adenine Count

654366 bp

Thymine Count

656411 bp

Guanine Count

1433580 bp

Cytosine Count

1430144 bp

Genome Length

4174501 bp

Protein-coding Genes

3797 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa carboxylase subunit epsilonPA27867_RS03100Not AvailableNegative709440 - 7096798738.06
acyl-coa carboxylase subunit betaPA27867_RS03105Not AvailableNegative709690 - 71128856789.1
biotin--[acetyl-coa-carboxylase] ligasePA27867_RS03110Not AvailablePositive711455 - 71229128771.2
ph domain-containing proteinPA27867_RS03115Not AvailablePositive712298 - 71286721136.8
gtra family proteinPA27867_RS03120Not AvailableNegative712838 - 71337719725.0
5-(carboxyamino)imidazole ribonucleotide synthasePA27867_RS03125Not AvailablePositive713496 - 71466241305.2
5-(carboxyamino)imidazole ribonucleotide mutasePA27867_RS03130Not AvailablePositive714749 - 71521615926.4
lcp family proteinPA27867_RS03135Not AvailablePositive715213 - 71657748552.2
glycosyltransferase family 1 proteinPA27867_RS03140Not AvailableNegative716656 - 71780140378.4
dtdp-4-dehydrorhamnose reductasePA27867_RS03145Not AvailableNegative717798 - 71865229778.6

Displaying genes 691 – 700 of 4073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.