Cryobacterium arcticum strain PAMC 27867

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Cryobacterium

Description

Cryobacterium arcticum strain PAMC 27867 is a Gram-positive bacterium characterized by its rod shape. This strain is notable for possessing three replicons, which are essential for its genetic stability and adaptability. The accessions for this strain are recorded in the National Center for Biotechnology Information (NCBI) under the identifiers NZ_CP016283.1, NZ_CP016282.1, and NZ_CP016284.1, which provide valuable genomic data for researchers. The Gram-positive nature of Cryobacterium arcticum suggests a thicker peptidoglycan layer in its cell wall compared to Gram-negative bacteria, which may contribute to its resilience in cold environments. This resilience is particularly significant given the strain's origin in Arctic conditions, where temperature and nutrient availability can be extreme. The presence of three replicons indicates a complex genomic structure that may allow for enhanced metabolic capabilities and adaptability, potentially enabling the bacterium to thrive in nutrient-limited and harsh environments typical of its habitat. This could also suggest an evolutionary advantage, allowing the strain to respond effectively to environmental changes. From a biological and ecological perspective, the study of Cryobacterium arcticum strain PAMC 27867 can provide insights into the microbial diversity of polar ecosystems. Understanding the genomic features and ecological roles of such microorganisms can aid in comprehending how life persists in extreme conditions and the potential implications for biogeochemical cycles in Arctic regions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCryobacterium
SpeciesCryobacterium arcticum
Strainstrain PAMC 27867

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cryobacterium arcticum strain PAMC 27867 chromosome 1, complete

Gene Summary

Adenine Count

654366 bp

Thymine Count

656411 bp

Guanine Count

1433580 bp

Cytosine Count

1430144 bp

Genome Length

4174501 bp

Protein-coding Genes

3797 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine betaine abc transporter substrate-binding proteinPA27867_RS11475Not AvailableNegative2562393 - 256328632336.2
proline/glycine betaine abc transporter permeasePA27867_RS11480Not AvailableNegative2563360 - 256435534936.5
glycine betaine/l-proline abc transporter atp-binding proteinPA27867_RS11485Not AvailableNegative2564352 - 256562345831.7
cation:dicarboxylate symporter family transporterPA27867_RS11490Not AvailableNegative2566031 - 256744348696.2
sensor histidine kinasePA27867_RS11495Not AvailablePositive2567638 - 256929057821.3
response regulatorPA27867_RS11500Not AvailablePositive2569283 - 257002326940.2
helix-turn-helix transcriptional regulatorPA27867_RS11505Not AvailablePositive2570116 - 25703137306.74
hypothetical proteinPA27867_RS11510Not AvailablePositive2570297 - 25705006701.35
sigma-70 family rna polymerase sigma factorPA27867_RS11515Not AvailableNegative2570722 - 257139323800.3
marr family winged helix-turn-helix transcriptional regulatorPA27867_RS11520Not AvailablePositive2571496 - 257193016113.4

Displaying genes 2381 – 2390 of 4073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.