Vibrio crassostreae 9CS106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio crassostreae strain 9CS106 is characterized by having a single replicon, indicating a streamlined genomic organization. This trait may contribute to its adaptability in various environmental conditions. The strain is cataloged under the accession number NZ_CP016228.1, which provides a reference for its genetic information and facilitates further research on its biology and ecology. As a member of the Vibrio genus, V. crassostreae is likely associated with aquatic environments, particularly in relation to its interactions with marine organisms such as oysters. The ecological role of this bacterium may involve symbiotic or pathogenic relationships with its hosts, which are significant for the health of marine ecosystems. Understanding the genomic characteristics of V. crassostreae 9CS106 could shed light on its metabolic capabilities and its potential impact on marine biodiversity. The presence of a single replicon suggests a potential efficiency in genomic replication and stability, which may allow V. crassostreae to thrive in fluctuating environmental conditions. This adaptability is critical in marine habitats, where salinity, temperature, and nutrient availability can vary. Thus, the study of V. crassostreae 9CS106 may provide insights into the ecological dynamics of Vibrio species in marine ecosystems and their roles in nutrient cycling or host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio crassostreae
Strain9CS106

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio crassostreae 9CS106
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio crassostreae 9CS106 chromosome 1, complete sequence.

Gene Summary

Adenine Count

929463 bp

Thymine Count

929642 bp

Guanine Count

752477 bp

Cytosine Count

753848 bp

Genome Length

3365430 bp

Protein-coding Genes

2869 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
taxi family trap transporter solute-binding subunitA134_RS15150Not AvailablePositive3289356 - 329032434480.0
trap transporter permeaseA134_RS15155Not AvailablePositive3290580 - 329315992455.0
universal stress proteinA134_RS15160Not AvailablePositive3293264 - 329370116117.7
d-2-hydroxyacid dehydrogenaseA134_RS15165Not AvailableNegative3293785 - 329474734686.7
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaA134_RS15170Not AvailableNegative3294784 - 329551828343.1
nramp family divalent metal transporterA134_RS15175Not AvailablePositive3295677 - 329695445443.8
rna polymerase-associated protein rapaA134_RS15180Not AvailableNegative3297047 - 3299956109571.0
phoh family proteinA134_RS15185Not AvailablePositive3300423 - 330180251591.6
metalloprotease tlddA134_RS15190Not AvailableNegative3301911 - 330335651241.6
carbon-nitrogen hydrolase family proteinA134_RS15195Not AvailableNegative3303376 - 330418830054.0

Displaying genes 2991 – 3000 of 3033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.