Vibrio crassostreae 9CS106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio crassostreae strain 9CS106 is characterized by having a single replicon, indicating a streamlined genomic organization. This trait may contribute to its adaptability in various environmental conditions. The strain is cataloged under the accession number NZ_CP016228.1, which provides a reference for its genetic information and facilitates further research on its biology and ecology. As a member of the Vibrio genus, V. crassostreae is likely associated with aquatic environments, particularly in relation to its interactions with marine organisms such as oysters. The ecological role of this bacterium may involve symbiotic or pathogenic relationships with its hosts, which are significant for the health of marine ecosystems. Understanding the genomic characteristics of V. crassostreae 9CS106 could shed light on its metabolic capabilities and its potential impact on marine biodiversity. The presence of a single replicon suggests a potential efficiency in genomic replication and stability, which may allow V. crassostreae to thrive in fluctuating environmental conditions. This adaptability is critical in marine habitats, where salinity, temperature, and nutrient availability can vary. Thus, the study of V. crassostreae 9CS106 may provide insights into the ecological dynamics of Vibrio species in marine ecosystems and their roles in nutrient cycling or host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio crassostreae
Strain9CS106

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio crassostreae 9CS106
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio crassostreae 9CS106 chromosome 1, complete sequence.

Gene Summary

Adenine Count

929463 bp

Thymine Count

929642 bp

Guanine Count

752477 bp

Cytosine Count

753848 bp

Genome Length

3365430 bp

Protein-coding Genes

2869 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna pseudouridine(1911/1915/1917) synthase rludA134_RS14235Not AvailableNegative3071315 - 307228936410.1
outer membrane protein assembly factor bamdA134_RS14240Not AvailablePositive3072427 - 307315527739.1
lytic transglycosylase fA134_RS14245Not AvailablePositive3073392 - 307472050686.1
ribosome hibernation-promoting factor, hpf/yfia familyA134_RS14250Not AvailablePositive3075145 - 307548012813.4
prephenate dehydrataseA134_RS14255Not AvailablePositive3075725 - 307690043809.6
putative bifunctional diguanylate cyclase/phosphodiesteraseA134_RS14260Not AvailablePositive3077234 - 307961290807.5
inosine/xanthosine triphosphataseA134_RS14265Not AvailablePositive3079575 - 308009618712.2
trp operon repressorA134_RS14270Not AvailableNegative3080225 - 308051810997.5
murein transglycosylaseA134_RS14275Not AvailableNegative3080691 - 308264074450.5
energy-dependent translational throttle protein ettaA134_RS14280Not AvailablePositive3082904 - 308457162130.7

Displaying genes 2811 – 2820 of 3033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.