Vibrio crassostreae 9CS106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio crassostreae strain 9CS106 is characterized by having a single replicon, indicating a streamlined genomic organization. This trait may contribute to its adaptability in various environmental conditions. The strain is cataloged under the accession number NZ_CP016228.1, which provides a reference for its genetic information and facilitates further research on its biology and ecology. As a member of the Vibrio genus, V. crassostreae is likely associated with aquatic environments, particularly in relation to its interactions with marine organisms such as oysters. The ecological role of this bacterium may involve symbiotic or pathogenic relationships with its hosts, which are significant for the health of marine ecosystems. Understanding the genomic characteristics of V. crassostreae 9CS106 could shed light on its metabolic capabilities and its potential impact on marine biodiversity. The presence of a single replicon suggests a potential efficiency in genomic replication and stability, which may allow V. crassostreae to thrive in fluctuating environmental conditions. This adaptability is critical in marine habitats, where salinity, temperature, and nutrient availability can vary. Thus, the study of V. crassostreae 9CS106 may provide insights into the ecological dynamics of Vibrio species in marine ecosystems and their roles in nutrient cycling or host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio crassostreae
Strain9CS106

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio crassostreae 9CS106
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio crassostreae 9CS106 chromosome 1, complete sequence.

Gene Summary

Adenine Count

929463 bp

Thymine Count

929642 bp

Guanine Count

752477 bp

Cytosine Count

753848 bp

Genome Length

3365430 bp

Protein-coding Genes

2869 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta family proteinA134_RS10535Not AvailablePositive2259557 - 226066341759.2
sce7726 family proteinA134_RS10540Not AvailableNegative2260608 - 226119822227.8
phenylalanine--trna ligase subunit betaA134_RS10545Not AvailableNegative2261477 - 226386485907.7
phenylalanine--trna ligase subunit alphaA134_RS10550Not AvailableNegative2263883 - 226486637111.1
ggdef domain-containing proteinA134_RS10555Not AvailableNegative2265085 - 226619442143.1
hypothetical proteinA134_RS10560Not AvailableNegative2266397 - 226760545773.0
outer membrane lipoprotein-sorting proteinA134_RS10565Not AvailableNegative2267615 - 226842130661.5
efflux rnd transporter permease subunitA134_RS10570Not AvailableNegative2268466 - 227091689873.6
tetr/acrr family transcriptional regulatorA134_RS10575Not AvailableNegative2271100 - 227188529106.8
hypothetical proteinA134_RS10580Not AvailablePositive2272431 - 227319228608.1

Displaying genes 2071 – 2080 of 3033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.