Minicystis rosea strain DSM 24000

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Deltaproteobacteria

Order

Polyangiales

Family

Polyangiaceae

Genus

Minicystis

Description

Minicystis rosea strain DSM 24000 is a bacterium primarily found in the rhizosphere, the region of soil influenced by plant roots. This specific habitat indicates a potential role in plant-microbe interactions, where it may contribute to nutrient cycling or plant health. The strain is characterized by having a single replicon, which suggests a streamlined genome organization, potentially advantageous for adaptation to its specialized ecological niche. The genetic information of Minicystis rosea strain DSM 24000 can be accessed through the accession number NZ_CP016211.1, providing a resource for further genomic and functional studies. Understanding the genomic makeup could shed light on the metabolic capabilities of this strain and its interactions within the rhizosphere. The ecological role of Minicystis rosea in the rhizosphere may involve promoting plant growth or enhancing soil health. Its presence in this environment highlights the importance of microbial diversity in supporting plant systems. The traits of this strain, particularly its habitat and genomic characteristics, suggest that it may be a valuable organism for further exploration in the context of sustainable agriculture and ecological health.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassDeltaproteobacteria
OrderPolyangiales
FamilyPolyangiaceae
GenusMinicystis
SpeciesMinicystis rosea
Strainstrain DSM 24000

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Minicystis rosea strain DSM 24000, complete genome.

Gene Summary

Adenine Count

2475909 bp

Thymine Count

2480282 bp

Guanine Count

5543182 bp

Cytosine Count

5541293 bp

Genome Length

16040666 bp

Protein-coding Genes

12615 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system membrane subunit tssmA7982_RS30410Not AvailableNegative7814163 - 7817900139847.0
dotu family type iv/vi secretion system proteinA7982_RS30415Not AvailableNegative7817958 - 781863524657.1
type vi secretion system baseplate subunit tsskA7982_RS30420Not AvailableNegative7818803 - 782016150258.7
type vi secretion system lipoprotein tssjA7982_RS30425Not AvailableNegative7820363 - 782103424260.1
type vi secretion system atpase tsshA7982_RS30430Not AvailableNegative7821228 - 782389797728.4
lytic transglycosylase domain-containing proteinA7982_RS30435Not AvailableNegative7824343 - 782607363809.4
type vi secretion system-associated fha domain proteinA7982_RS30440Not AvailablePositive7826261 - 782756547911.2
hypothetical proteinA7982_RS30445Not AvailablePositive7827781 - 782835319712.8
hypothetical proteinA7982_RS30450Not AvailableNegative7828652 - 782956933729.1
type vi secretion system tube protein tssdA7982_RS30455Not AvailablePositive7829960 - 783046018773.6

Displaying genes 6191 – 6200 of 12780 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.