Ectopseudomonas alcaliphila JAB1

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Ectopseudomonas alcaliphila JAB1 is an aerobic, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This organism has been cataloged under the accession number NZ_CP016162.1 and possesses a single replicon, indicating a streamlined genetic architecture. As an aerobic bacterium, Ectopseudomonas alcaliphila JAB1 requires oxygen for its metabolic processes, positioning it within environments where oxygen is readily available. This trait may influence its ecological niche, allowing it to thrive in oxygen-rich habitats, such as soil or water, where it can engage in various biochemical interactions. The flagella present in this species are significant for mobility, enabling Ectopseudomonas alcaliphila JAB1 to navigate its environment effectively. This motility can play a crucial role in nutrient acquisition and colonization of ecological niches, contributing to its survival and proliferation in competitive habitats. In summary, Ectopseudomonas alcaliphila JAB1's aerobic nature and motility via flagella suggest that it occupies ecological niches where oxygen is plentiful, potentially influencing its interactions with other microorganisms and its role in biogeochemical cycles. The presence of a single replicon may also reflect evolutionary adaptations that optimize its efficiency in such environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas alcaliphila
StrainJAB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ectopseudomonas alcaliphila JAB1 chromosome, complete genome.

Gene Summary

Adenine Count

998395 bp

Thymine Count

1002174 bp

Guanine Count

1668694 bp

Cytosine Count

1671030 bp

Genome Length

5340293 bp

Protein-coding Genes

4893 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hu family dna-binding proteinUYA_RS23935Not AvailableNegative5126045 - 51263179655.66
nad(p)/fad-dependent oxidoreductaseUYA_RS23940Not AvailableNegative5126506 - 512765439983.4
outer membrane beta-barrel proteinUYA_RS23945Not AvailableNegative5127845 - 512860027623.2
hemolysin family proteinUYA_RS23950Not AvailableNegative5128851 - 513019149719.6
phosphate regulon sensor histidine kinase phorUYA_RS23955Not AvailableNegative5130254 - 513157349664.7
phosphate regulon transcriptional regulator phobUYA_RS23960Not AvailableNegative5131810 - 513249925642.0
hypothetical proteinUYA_RS23965Not AvailablePositive5132799 - 513318513881.7
4-hydroxybenzoate octaprenyltransferaseUYA_RS23970Not AvailableNegative5133216 - 513410633102.9
chorismate--pyruvate lyase family proteinUYA_RS23975Not AvailableNegative5134366 - 513491720369.2
is30 family transposaseUYA_RS25265Not AvailableNegative5135133 - 51352644605.89

Displaying genes 4791 – 4800 of 4986 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.