Ectopseudomonas alcaliphila JAB1

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Ectopseudomonas alcaliphila JAB1 is an aerobic, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This organism has been cataloged under the accession number NZ_CP016162.1 and possesses a single replicon, indicating a streamlined genetic architecture. As an aerobic bacterium, Ectopseudomonas alcaliphila JAB1 requires oxygen for its metabolic processes, positioning it within environments where oxygen is readily available. This trait may influence its ecological niche, allowing it to thrive in oxygen-rich habitats, such as soil or water, where it can engage in various biochemical interactions. The flagella present in this species are significant for mobility, enabling Ectopseudomonas alcaliphila JAB1 to navigate its environment effectively. This motility can play a crucial role in nutrient acquisition and colonization of ecological niches, contributing to its survival and proliferation in competitive habitats. In summary, Ectopseudomonas alcaliphila JAB1's aerobic nature and motility via flagella suggest that it occupies ecological niches where oxygen is plentiful, potentially influencing its interactions with other microorganisms and its role in biogeochemical cycles. The presence of a single replicon may also reflect evolutionary adaptations that optimize its efficiency in such environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas alcaliphila
StrainJAB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ectopseudomonas alcaliphila JAB1 chromosome, complete genome.

Gene Summary

Adenine Count

998395 bp

Thymine Count

1002174 bp

Guanine Count

1668694 bp

Cytosine Count

1671030 bp

Genome Length

5340293 bp

Protein-coding Genes

4893 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
doda-type extradiol aromatic ring-opening family dioxygenaseUYA_RS13460Not AvailablePositive2888799 - 288956627694.1
tetr/acrr family transcriptional regulatorUYA_RS13465Not AvailableNegative2889563 - 289014721437.5
hotdog fold domain-containing proteinUYA_RS13470Not AvailablePositive2890251 - 289068815674.0
yhdh/yhfp family quinone oxidoreductaseUYA_RS13475Not AvailableNegative2890726 - 289171534535.9
protease sohbUYA_RS13480Not AvailableNegative2891752 - 289277137717.7
histidine phosphatase family proteinUYA_RS13485Not AvailablePositive2892970 - 289366825688.7
scp2 sterol-binding domain-containing proteinUYA_RS13490Not AvailablePositive2893725 - 289403610939.2
phosphotransferase family proteinUYA_RS13495Not AvailablePositive2894258 - 289532540461.4
sdr family oxidoreductaseUYA_RS13500Not AvailablePositive2895342 - 289610926701.3
hypothetical proteinUYA_RS13505Not AvailableNegative2896416 - 289706323862.2

Displaying genes 2701 – 2710 of 4986 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.