Ectopseudomonas alcaliphila JAB1

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Ectopseudomonas alcaliphila JAB1 is an aerobic, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This organism has been cataloged under the accession number NZ_CP016162.1 and possesses a single replicon, indicating a streamlined genetic architecture. As an aerobic bacterium, Ectopseudomonas alcaliphila JAB1 requires oxygen for its metabolic processes, positioning it within environments where oxygen is readily available. This trait may influence its ecological niche, allowing it to thrive in oxygen-rich habitats, such as soil or water, where it can engage in various biochemical interactions. The flagella present in this species are significant for mobility, enabling Ectopseudomonas alcaliphila JAB1 to navigate its environment effectively. This motility can play a crucial role in nutrient acquisition and colonization of ecological niches, contributing to its survival and proliferation in competitive habitats. In summary, Ectopseudomonas alcaliphila JAB1's aerobic nature and motility via flagella suggest that it occupies ecological niches where oxygen is plentiful, potentially influencing its interactions with other microorganisms and its role in biogeochemical cycles. The presence of a single replicon may also reflect evolutionary adaptations that optimize its efficiency in such environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas alcaliphila
StrainJAB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ectopseudomonas alcaliphila JAB1 chromosome, complete genome.

Gene Summary

Adenine Count

998395 bp

Thymine Count

1002174 bp

Guanine Count

1668694 bp

Cytosine Count

1671030 bp

Genome Length

5340293 bp

Protein-coding Genes

4893 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylamine utilization proteinUYA_RS05810Not AvailablePositive1295267 - 129595324476.1
putative bifunctional diguanylate cyclase/phosphodiesteraseUYA_RS05815Not AvailablePositive1295940 - 129827984338.1
duf3034 family proteinUYA_RS05820Not AvailablePositive1298283 - 129913430742.6
group i truncated hemoglobinUYA_RS05825Not AvailablePositive1299137 - 129955615421.8
d-sedoheptulose 7-phosphate isomeraseUYA_RS05830Not AvailableNegative1299566 - 130015321229.4
m18 family aminopeptidaseUYA_RS05835Not AvailableNegative1300168 - 130145746981.5
outer membrane protein transport proteinUYA_RS05840Not AvailableNegative1301644 - 130306851203.8
alkane oxidation protein activator prabUYA_RS05845Not AvailableNegative1303227 - 130374816840.0
efflux rnd transporter periplasmic adaptor subunitUYA_RS05850Not AvailableNegative1304328 - 130559345702.9
tolc family proteinUYA_RS05855Not AvailableNegative1305583 - 130707054813.0

Displaying genes 1171 – 1180 of 4986 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.