Pseudomonas sp. TCU-HL1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. TCU-HL1 is characterized by having two replicons, which contribute to its genomic complexity and adaptability. The organism is represented in the genomic databases by two specific accession numbers: NZ_CP015992.1 and NZ_CP015993.1. These replicons may encode essential genes that facilitate various metabolic processes and environmental resilience, traits commonly associated with the Pseudomonas genus. The presence of multiple replicons in Pseudomonas sp. TCU-HL1 could suggest a potential for enhanced genetic diversity and the ability to adapt to varying environmental conditions. This adaptability is a hallmark of many Pseudomonas species, which are known for their versatility in utilizing different substrates and thriving in diverse habitats, including soil, water, and plant surfaces. From a biological and ecological perspective, the dual-replicon structure of Pseudomonas sp. TCU-HL1 could offer insights into its ecological roles, particularly in bioremediation processes. The ability to harbor varied genetic information may enable the strain to degrade pollutants or utilize organic compounds effectively, contributing to nutrient cycling and ecosystem health. Thus, Pseudomonas sp. TCU-HL1 exemplifies the ecological significance of microbial diversity and adaptability in natural environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. TCU-HL1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. TCU-HL1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. TCU-HL1 isolate Hualien, Taiwan plasmid pTCUH,

Gene Summary

Adenine Count

2467 bp

Thymine Count

2843 bp

Guanine Count

3734 bp

Cytosine Count

3646 bp

Genome Length

12690 bp

Protein-coding Genes

18 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
superoxide dismutaseTHL1_RS23340Not AvailablePositive5082908 - 508348921328.0
bifunctional diguanylate cyclase/phosphodiesteraseTHL1_RS23345Not AvailablePositive5083777 - 508584377743.5
gide domain-containing proteinTHL1_RS23350Not AvailableNegative5085952 - 508685732999.3
lema family proteinTHL1_RS23355Not AvailableNegative5086859 - 508743120969.4
imelysin family proteinTHL1_RS23360Not AvailablePositive5087631 - 508896546691.6
di-heme oxidoredictase family proteinTHL1_RS23365Not AvailablePositive5089255 - 509068550790.2
imelysin family proteinTHL1_RS23370Not AvailablePositive5090696 - 509176038631.1
duf1513 domain-containing proteinTHL1_RS23375Not AvailablePositive5091762 - 509285640044.8
methyl-accepting chemotaxis proteinTHL1_RS23380Not AvailablePositive5093401 - 509503257995.6
efflux rnd transporter periplasmic adaptor subunitTHL1_RS23385Not AvailablePositive5095275 - 509642941783.4

Displaying genes 4791 – 4800 of 5853 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.