Pseudomonas sp. TCU-HL1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. TCU-HL1 is characterized by having two replicons, which contribute to its genomic complexity and adaptability. The organism is represented in the genomic databases by two specific accession numbers: NZ_CP015992.1 and NZ_CP015993.1. These replicons may encode essential genes that facilitate various metabolic processes and environmental resilience, traits commonly associated with the Pseudomonas genus. The presence of multiple replicons in Pseudomonas sp. TCU-HL1 could suggest a potential for enhanced genetic diversity and the ability to adapt to varying environmental conditions. This adaptability is a hallmark of many Pseudomonas species, which are known for their versatility in utilizing different substrates and thriving in diverse habitats, including soil, water, and plant surfaces. From a biological and ecological perspective, the dual-replicon structure of Pseudomonas sp. TCU-HL1 could offer insights into its ecological roles, particularly in bioremediation processes. The ability to harbor varied genetic information may enable the strain to degrade pollutants or utilize organic compounds effectively, contributing to nutrient cycling and ecosystem health. Thus, Pseudomonas sp. TCU-HL1 exemplifies the ecological significance of microbial diversity and adaptability in natural environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. TCU-HL1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. TCU-HL1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. TCU-HL1 isolate Hualien, Taiwan plasmid pTCUH,

Gene Summary

Adenine Count

2467 bp

Thymine Count

2843 bp

Guanine Count

3734 bp

Cytosine Count

3646 bp

Genome Length

12690 bp

Protein-coding Genes

18 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murr/rpir family transcriptional regulatorTHL1_RS01085Not AvailablePositive232390 - 23326532266.3
abc transporter substrate-binding proteinTHL1_RS01090Not AvailablePositive233292 - 23405027706.9
abc transporter permeaseTHL1_RS01095Not AvailablePositive234104 - 23482325683.9
abc transporter permeaseTHL1_RS01100Not AvailablePositive234820 - 23552426108.4
fad-binding oxidoreductaseTHL1_RS01105Not AvailablePositive235574 - 23681545128.1
amino acid abc transporter atp-binding proteinTHL1_RS01110Not AvailablePositive236878 - 23765728207.5
class i sam-dependent rrna methyltransferaseTHL1_RS01115Not AvailableNegative237864 - 23906043984.9
hdod domain-containing proteinTHL1_RS01120Not AvailablePositive239293 - 24010530115.2
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseTHL1_RS01125Not AvailablePositive240120 - 24093230191.6
multidrug transporterTHL1_RS01130Not AvailablePositive241173 - 24151111589.2

Displaying genes 331 – 340 of 5853 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.