Pseudomonas citronellolis strain SJTE-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas citronellolis strain SJTE-3 is characterized by having two replicons, which are crucial for its genomic organization and stability. The strain's genomic data is documented under two accession numbers: NZ_CP015878.1 and NZ_CP015879.1. These accessions indicate the availability of its complete genomic sequences, which can provide insights into the genetic basis of its functions and adaptations. As a member of the Pseudomonas genus, Pseudomonas citronellolis typically exhibits characteristics such as metabolic versatility and resilience in various environments, which can be important for its ecological roles. The presence of two replicons may facilitate the strain's ability to adapt to diverse environmental conditions by allowing for the independent regulation of genes, which may be crucial for survival in fluctuating habitats. The dual-replicon system could potentially enhance the strain's capabilities in nutrient acquisition, bioremediation, or interactions with other microorganisms. Understanding these traits is essential for exploring the ecological implications of Pseudomonas citronellolis strain SJTE-3 within its habitat, as it may contribute to nutrient cycling and microbial community dynamics. This insight into the genomic structure and potential ecological roles highlights the significance of studying such strains in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas citronellolis
Strainstrain SJTE-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas citronellolis strain SJTE-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas citronellolis strain SJTE-3 chromosome, complete

Gene Summary

Adenine Count

1207417 bp

Thymine Count

1201989 bp

Guanine Count

2447037 bp

Cytosine Count

2452978 bp

Genome Length

7309421 bp

Protein-coding Genes

6292 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitA9C11_RS02700Not AvailablePositive641056 - 644199112989.0
adec/adek/oprm family multidrug efflux complex outer membrane factorA9C11_RS02705Not AvailablePositive644201 - 64564952188.4
upf0158 family proteinA9C11_RS02710Not AvailableNegative646260 - 64668815966.0
methyl-accepting chemotaxis proteinA9C11_RS02715Not AvailableNegative646757 - 64833155905.8
methyl-accepting chemotaxis proteinA9C11_RS02720Not AvailableNegative648551 - 65046469241.1
16s rrna (uracil(1498)-n(3))-methyltransferaseA9C11_RS02725Not AvailableNegative650623 - 65133025968.0
twin-arginine translocase subunit tatcA9C11_RS02730Not AvailableNegative651327 - 65212729798.3
sec-independent protein translocase protein tatbA9C11_RS02735Not AvailableNegative652124 - 65257915716.0
twin-arginine translocase tata/tate family subunitA9C11_RS02740Not AvailableNegative652593 - 6528389206.08
phosphoribosyl-atp diphosphataseA9C11_RS02745Not AvailableNegative652864 - 65320212181.3

Displaying genes 811 – 820 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.