Pseudomonas citronellolis strain SJTE-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas citronellolis strain SJTE-3 is characterized by having two replicons, which are crucial for its genomic organization and stability. The strain's genomic data is documented under two accession numbers: NZ_CP015878.1 and NZ_CP015879.1. These accessions indicate the availability of its complete genomic sequences, which can provide insights into the genetic basis of its functions and adaptations. As a member of the Pseudomonas genus, Pseudomonas citronellolis typically exhibits characteristics such as metabolic versatility and resilience in various environments, which can be important for its ecological roles. The presence of two replicons may facilitate the strain's ability to adapt to diverse environmental conditions by allowing for the independent regulation of genes, which may be crucial for survival in fluctuating habitats. The dual-replicon system could potentially enhance the strain's capabilities in nutrient acquisition, bioremediation, or interactions with other microorganisms. Understanding these traits is essential for exploring the ecological implications of Pseudomonas citronellolis strain SJTE-3 within its habitat, as it may contribute to nutrient cycling and microbial community dynamics. This insight into the genomic structure and potential ecological roles highlights the significance of studying such strains in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas citronellolis
Strainstrain SJTE-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas citronellolis strain SJTE-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas citronellolis strain SJTE-3 chromosome, complete

Gene Summary

Adenine Count

1207417 bp

Thymine Count

1201989 bp

Guanine Count

2447037 bp

Cytosine Count

2452978 bp

Genome Length

7309421 bp

Protein-coding Genes

6292 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nickel-dependent hydrogenase large subunitA9C11_RS20690Not AvailablePositive4800996 - 480245353175.6
nickel-responsive transcriptional regulator nikrA9C11_RS20695Not AvailablePositive4802468 - 480292317262.5
sensor histidine kinaseA9C11_RS20700Not AvailablePositive4802928 - 480424447173.3
hoxn/hupn/nixa family nickel/cobalt transporterA9C11_RS20705Not AvailablePositive4804402 - 480544237173.0
hydrogenase small subunitA9C11_RS20710Not AvailablePositive4805826 - 480691139366.2
nickel-dependent hydrogenase large subunitA9C11_RS20715Not AvailablePositive4806935 - 480879168756.6
ni/fe-hydrogenase, b-type cytochrome subunitA9C11_RS20720Not AvailablePositive4808852 - 480953525566.4
hyad/hybd family hydrogenase maturation endopeptidaseA9C11_RS20725Not AvailablePositive4809532 - 481017023697.4
hypc/hybg/hupf family hydrogenase formation chaperoneA9C11_RS20730Not AvailablePositive4810172 - 481049511360.7
hydrogenaseA9C11_RS20735Not AvailablePositive4810492 - 481097417633.2

Displaying genes 4441 – 4450 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.