Pseudomonas citronellolis strain SJTE-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas citronellolis strain SJTE-3 is characterized by having two replicons, which are crucial for its genomic organization and stability. The strain's genomic data is documented under two accession numbers: NZ_CP015878.1 and NZ_CP015879.1. These accessions indicate the availability of its complete genomic sequences, which can provide insights into the genetic basis of its functions and adaptations. As a member of the Pseudomonas genus, Pseudomonas citronellolis typically exhibits characteristics such as metabolic versatility and resilience in various environments, which can be important for its ecological roles. The presence of two replicons may facilitate the strain's ability to adapt to diverse environmental conditions by allowing for the independent regulation of genes, which may be crucial for survival in fluctuating habitats. The dual-replicon system could potentially enhance the strain's capabilities in nutrient acquisition, bioremediation, or interactions with other microorganisms. Understanding these traits is essential for exploring the ecological implications of Pseudomonas citronellolis strain SJTE-3 within its habitat, as it may contribute to nutrient cycling and microbial community dynamics. This insight into the genomic structure and potential ecological roles highlights the significance of studying such strains in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas citronellolis
Strainstrain SJTE-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas citronellolis strain SJTE-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas citronellolis strain SJTE-3 chromosome, complete

Gene Summary

Adenine Count

1207417 bp

Thymine Count

1201989 bp

Guanine Count

2447037 bp

Cytosine Count

2452978 bp

Genome Length

7309421 bp

Protein-coding Genes

6292 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenase family proteinA9C11_RS18770Not AvailableNegative4312922 - 431407041969.6
recombination mediator recrA9C11_RS18775Not AvailableNegative4314176 - 431477221106.8
ybab/ebfc family nucleoid-associated proteinA9C11_RS18780Not AvailableNegative4314886 - 431521211829.5
dna polymerase iii subunit gamma/tauA9C11_RS18785Not AvailableNegative4315256 - 431739475829.1
abc transporter substrate-binding proteinA9C11_RS18790Not AvailablePositive4317535 - 431825726789.2
tetratricopeptide repeat proteinA9C11_RS18795Not AvailableNegative4318334 - 431958146497.2
hlyd family type i secretion periplasmic adaptor subunitA9C11_RS18800Not AvailableNegative4319593 - 432079244116.8
type i secretion system permease/atpaseA9C11_RS18805Not AvailableNegative4320846 - 432301179763.7
tolc family outer membrane proteinA9C11_RS18810Not AvailableNegative4323008 - 432442051650.3
hypothetical proteinA9C11_RS18815Not AvailableNegative4324715 - 432503510215.2

Displaying genes 4031 – 4040 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.