Pseudomonas citronellolis strain SJTE-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas citronellolis strain SJTE-3 is characterized by having two replicons, which are crucial for its genomic organization and stability. The strain's genomic data is documented under two accession numbers: NZ_CP015878.1 and NZ_CP015879.1. These accessions indicate the availability of its complete genomic sequences, which can provide insights into the genetic basis of its functions and adaptations. As a member of the Pseudomonas genus, Pseudomonas citronellolis typically exhibits characteristics such as metabolic versatility and resilience in various environments, which can be important for its ecological roles. The presence of two replicons may facilitate the strain's ability to adapt to diverse environmental conditions by allowing for the independent regulation of genes, which may be crucial for survival in fluctuating habitats. The dual-replicon system could potentially enhance the strain's capabilities in nutrient acquisition, bioremediation, or interactions with other microorganisms. Understanding these traits is essential for exploring the ecological implications of Pseudomonas citronellolis strain SJTE-3 within its habitat, as it may contribute to nutrient cycling and microbial community dynamics. This insight into the genomic structure and potential ecological roles highlights the significance of studying such strains in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas citronellolis
Strainstrain SJTE-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas citronellolis strain SJTE-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas citronellolis strain SJTE-3 chromosome, complete

Gene Summary

Adenine Count

1207417 bp

Thymine Count

1201989 bp

Guanine Count

2447037 bp

Cytosine Count

2452978 bp

Genome Length

7309421 bp

Protein-coding Genes

6292 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phage integrase n-terminal domain-containing proteinA9C11_RS06510Not AvailableNegative1468577 - 146960538180.4
phage integrase n-terminal domain-containing proteinA9C11_RS36255Not AvailablePositive1470473 - 147100119302.2
mobh family relaxaseA9C11_RS06520Not AvailableNegative1471417 - 147321365757.2
nucleotidyl transferase abieii/abigii toxin family proteinA9C11_RS06525Not AvailableNegative1473419 - 147433934260.3
type iv toxin-antitoxin system abiei family antitoxin domain-containing proteinA9C11_RS06530Not AvailableNegative1474332 - 147509027817.4
duf3742 family proteinA9C11_RS06535Not AvailablePositive1475321 - 147568913634.3
conjugal transfer protein trag n-terminal domain-containing proteinA9C11_RS06540Not AvailableNegative1475719 - 147723955557.1
hypothetical proteinA9C11_RS06545Not AvailableNegative1477255 - 147760813512.7
integrating conjugative element proteinA9C11_RS06550Not AvailableNegative1477605 - 147901149311.5
tigr03756 family integrating conjugative element proteinA9C11_RS06555Not AvailableNegative1479022 - 147996634396.7

Displaying genes 1571 – 1580 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.