Pseudomonas citronellolis strain SJTE-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas citronellolis strain SJTE-3 is characterized by having two replicons, which are crucial for its genomic organization and stability. The strain's genomic data is documented under two accession numbers: NZ_CP015878.1 and NZ_CP015879.1. These accessions indicate the availability of its complete genomic sequences, which can provide insights into the genetic basis of its functions and adaptations. As a member of the Pseudomonas genus, Pseudomonas citronellolis typically exhibits characteristics such as metabolic versatility and resilience in various environments, which can be important for its ecological roles. The presence of two replicons may facilitate the strain's ability to adapt to diverse environmental conditions by allowing for the independent regulation of genes, which may be crucial for survival in fluctuating habitats. The dual-replicon system could potentially enhance the strain's capabilities in nutrient acquisition, bioremediation, or interactions with other microorganisms. Understanding these traits is essential for exploring the ecological implications of Pseudomonas citronellolis strain SJTE-3 within its habitat, as it may contribute to nutrient cycling and microbial community dynamics. This insight into the genomic structure and potential ecological roles highlights the significance of studying such strains in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas citronellolis
Strainstrain SJTE-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas citronellolis strain SJTE-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas citronellolis strain SJTE-3 chromosome, complete

Gene Summary

Adenine Count

1207417 bp

Thymine Count

1201989 bp

Guanine Count

2447037 bp

Cytosine Count

2452978 bp

Genome Length

7309421 bp

Protein-coding Genes

6292 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l25/general stress protein ctcA9C11_RS04580Not AvailableNegative1030790 - 103140121815.4
ribose-phosphate pyrophosphokinaseA9C11_RS04585Not AvailableNegative1031508 - 103244933971.2
Trna-glnNot AvailableNot AvailablePositive1032534 - 1032608Not Available
Trna-glnNot AvailableNot AvailablePositive1032668 - 1032742Not Available
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseA9C11_RS04600Not AvailableNegative1032775 - 103362330908.1
lipoprotein insertase outer membrane protein lolbA9C11_RS04605Not AvailableNegative1033625 - 103424823031.4
tetratricopeptide repeat proteinA9C11_RS04610Not AvailableNegative1034257 - 103597864324.0
glutamyl-trna reductaseA9C11_RS04615Not AvailablePositive1036168 - 103743646326.9
peptide chain release factor 1A9C11_RS04620Not AvailablePositive1037433 - 103851539973.9
peptide chain release factor n(5)-glutamine methyltransferaseA9C11_RS04625Not AvailablePositive1038522 - 103935230450.7

Displaying genes 1171 – 1180 of 7021 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.