Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor regulatory protein rseb | A7983_RS02255 | Not Available | Negative | 496618 - 497580 | 35701.6 |
| anti-sigma-e factor rsea | A7983_RS02260 | Not Available | Negative | 497580 - 498227 | 23590.0 |
| rna polymerase sigma factor rpoe | A7983_RS02265 | Not Available | Negative | 498287 - 498862 | 21752.9 |
| l-aspartate oxidase | A7983_RS02270 | Not Available | Positive | 499262 - 500863 | 59716.1 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | A7983_RS02275 | Not Available | Negative | 500938 - 501684 | 27868.4 |
| atp-dependent rna helicase srmb | A7983_RS02280 | Not Available | Positive | 501819 - 503144 | 49864.9 |
| autonomous glycyl radical cofactor grca | A7983_RS02285 | Not Available | Negative | 503217 - 503600 | 14345.0 |
| uracil-dna glycosylase | A7983_RS02290 | Not Available | Positive | 503994 - 504680 | 25501.3 |
| Trna-ala | Not Available | Not Available | Positive | 504858 - 504933 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 504981 - 505056 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
