Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7983_RS21260 | Not Available | Negative | 4681081 - 4681518 | 17075.2 |
| rhs repeat-associated core domain-containing protein | A7983_RS21265 | Not Available | Negative | 4681534 - 4685808 | 160641.0 |
| duf1795 domain-containing protein | A7983_RS21270 | Not Available | Negative | 4685801 - 4686244 | 16259.1 |
| type vi secretion system tip protein vgrg | A7983_RS21275 | Not Available | Negative | 4686273 - 4688102 | 66919.2 |
| hcp family type vi secretion system effector | A7983_RS21280 | Not Available | Negative | 4688224 - 4688742 | 19095.6 |
| hypothetical protein | A7983_RS24075 | Not Available | Negative | 4688927 - 4689145 | 8033.51 |
| helix-turn-helix domain-containing protein | A7983_RS21285 | Not Available | Positive | 4689365 - 4689613 | 9201.84 |
| duf4303 domain-containing protein | A7983_RS21295 | Not Available | Negative | 4690161 - 4690685 | 20109.3 |
| ntf2 fold immunity protein | A7983_RS21300 | Not Available | Negative | 4690806 - 4691195 | 15804.6 |
| hypothetical protein | A7983_RS21305 | Not Available | Negative | 4691404 - 4691691 | 11113.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
