Pectobacterium wasabiae CFBP 3304

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium wasabiae CFBP 3304 is a Gram-negative bacterium characterized by the presence of flagella, which contributes to its motility. This species is notable for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of P. wasabiae CFBP 3304 is accessible through the accession number NZ_CP015750.1, which provides a resource for further genetic and functional studies. As a member of the Pectobacterium genus, P. wasabiae is associated with soft rot diseases in plants, particularly affecting crops such as vegetables. The presence of flagella suggests that P. wasabiae CFBP 3304 can navigate its environment effectively, potentially aiding in its pathogenicity by reaching host tissues. Understanding the motility and genomic characteristics of this bacterium can provide insights into its ecological role, particularly in agricultural settings where it may impact crop yield and quality. The genomic data available may also enable researchers to explore the molecular mechanisms of pathogenicity and resistance, informing strategies for disease management in affected crops. The study of P. wasabiae CFBP 3304 can contribute to a broader understanding of plant-microbe interactions, emphasizing the importance of microbial traits in ecological dynamics and agricultural health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium wasabiae
StrainCFBP 3304

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium wasabiae CFBP 3304 chromosome, complete genome.

Gene Summary

Adenine Count

1247379 bp

Thymine Count

1246330 bp

Guanine Count

1267085 bp

Cytosine Count

1282434 bp

Genome Length

5043228 bp

Protein-coding Genes

4419 genes

Non-Coding Genes

278 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
terminus macrodomain insulation protein yfbvA7983_RS00930Not AvailableNegative191840 - 19229517040.9
acetate kinaseA7983_RS00935Not AvailablePositive192737 - 19393943615.4
phosphate acetyltransferaseA7983_RS00940Not AvailablePositive194019 - 19615777072.8
duf817 domain-containing proteinA7983_RS00945Not AvailablePositive196278 - 19713833185.0
nudix hydrolase yfcdA7983_RS00950Not AvailableNegative197221 - 19787124188.9
phosphodiesteraseA7983_RS00955Not AvailableNegative198264 - 19881520462.6
gsh-dependent disulfide bond oxidoreductaseA7983_RS00960Not AvailablePositive199080 - 19970624088.4
dihydroneopterin triphosphate 2'-epimeraseA7983_RS00965Not AvailablePositive199830 - 20020114336.2
tigr01777 family oxidoreductaseA7983_RS00970Not AvailablePositive200220 - 20112533178.2
histidine abc transporter atp-binding protein hispA7983_RS00975Not AvailableNegative201230 - 20200328750.0

Displaying genes 411 – 420 of 4697 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.