Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | A7983_RS19695 | Not Available | Negative | 4327331 - 4328671 | 50283.5 |
| type vi secretion system lipoprotein tssj | A7983_RS19700 | Not Available | Negative | 4328681 - 4329178 | 18412.5 |
| hypothetical protein | A7983_RS19705 | Not Available | Negative | 4329202 - 4329783 | 21254.4 |
| hypothetical protein | A7983_RS24680 | Not Available | Positive | 4330593 - 4330721 | 4582.27 |
| rhamnogalacturonan acetylesterase | A7983_RS19710 | Not Available | Negative | 4331049 - 4332812 | 63502.0 |
| antibiotic biosynthesis monooxygenase family protein | A7983_RS23670 | Not Available | Positive | 4333271 - 4333492 | 8705.46 |
| mbl fold metallo-hydrolase | A7983_RS19715 | Not Available | Negative | 4333755 - 4334816 | 40409.1 |
| hypothetical protein | A7983_RS19720 | Not Available | Negative | 4335045 - 4335638 | 21607.6 |
| rna ligase family protein | A7983_RS19725 | Not Available | Positive | 4336139 - 4337023 | 33531.0 |
| aaa family atpase | A7983_RS19730 | Not Available | Positive | 4337029 - 4338174 | 43503.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
