Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated fha domain protein tagh | A7983_RS19650 | Not Available | Negative | 4314663 - 4316351 | 60991.1 |
| hypothetical protein | A7983_RS19655 | Not Available | Negative | 4316610 - 4317269 | 25191.1 |
| duf5675 family protein | A7983_RS23665 | Not Available | Negative | 4317286 - 4317732 | 16478.0 |
| hcp family type vi secretion system effector | A7983_RS19660 | Not Available | Negative | 4317786 - 4318268 | 16931.7 |
| type vi secretion system contractile sheath large subunit | A7983_RS19665 | Not Available | Negative | 4318578 - 4320086 | 56991.8 |
| type vi secretion system contractile sheath small subunit | A7983_RS19670 | Not Available | Negative | 4320086 - 4320616 | 19669.5 |
| type vi secretion system protein tssa | A7983_RS19675 | Not Available | Negative | 4320696 - 4321715 | 37491.0 |
| type vi secretion system-associated protein tagf | A7983_RS19680 | Not Available | Negative | 4321727 - 4322434 | 26365.9 |
| type vi secretion system membrane subunit tssm | A7983_RS19685 | Not Available | Negative | 4322449 - 4326066 | 134325.0 |
| dotu family type vi secretion system protein | A7983_RS19690 | Not Available | Negative | 4326070 - 4327311 | 45865.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
