Pectobacterium wasabiae CFBP 3304

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium wasabiae CFBP 3304 is a Gram-negative bacterium characterized by the presence of flagella, which contributes to its motility. This species is notable for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of P. wasabiae CFBP 3304 is accessible through the accession number NZ_CP015750.1, which provides a resource for further genetic and functional studies. As a member of the Pectobacterium genus, P. wasabiae is associated with soft rot diseases in plants, particularly affecting crops such as vegetables. The presence of flagella suggests that P. wasabiae CFBP 3304 can navigate its environment effectively, potentially aiding in its pathogenicity by reaching host tissues. Understanding the motility and genomic characteristics of this bacterium can provide insights into its ecological role, particularly in agricultural settings where it may impact crop yield and quality. The genomic data available may also enable researchers to explore the molecular mechanisms of pathogenicity and resistance, informing strategies for disease management in affected crops. The study of P. wasabiae CFBP 3304 can contribute to a broader understanding of plant-microbe interactions, emphasizing the importance of microbial traits in ecological dynamics and agricultural health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium wasabiae
StrainCFBP 3304

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium wasabiae CFBP 3304 chromosome, complete genome.

Gene Summary

Adenine Count

1247379 bp

Thymine Count

1246330 bp

Guanine Count

1267085 bp

Cytosine Count

1282434 bp

Genome Length

5043228 bp

Protein-coding Genes

4419 genes

Non-Coding Genes

278 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase cytochrome b556 subunitA7983_RS15260Not AvailablePositive3376089 - 337647814066.7
succinate dehydrogenase membrane anchor subunitA7983_RS15265Not AvailablePositive3376472 - 337681912802.2
succinate dehydrogenase flavoprotein subunitA7983_RS15270Not AvailablePositive3376819 - 337858564521.6
succinate dehydrogenase iron-sulfur subunitA7983_RS15275Not AvailablePositive3378602 - 337931826699.4
2-oxoglutarate dehydrogenase e1 componentA7983_RS15280Not AvailablePositive3379594 - 3382401105510.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseA7983_RS15285Not AvailablePositive3382417 - 338364344447.4
adp-forming succinate--coa ligase subunit betaA7983_RS15290Not AvailablePositive3383844 - 338501041199.7
succinate--coa ligase subunit alphaA7983_RS15295Not AvailablePositive3385010 - 338588229840.3
response regulator transcription factorA7983_RS15305Not AvailablePositive3386328 - 338692722054.9
rnase a-like domain-containing proteinA7983_RS15310Not AvailableNegative3387018 - 338756619713.4

Displaying genes 3271 – 3280 of 4697 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.