Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | A7983_RS13300 | Not Available | Negative | 2928152 - 2929309 | 42709.8 |
| methylthioribulose 1-phosphate dehydratase | A7983_RS13305 | Not Available | Positive | 2929495 - 2930112 | 22672.1 |
| acireductone synthase | A7983_RS13310 | Not Available | Positive | 2930109 - 2930798 | 25922.2 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | A7983_RS13315 | Not Available | Positive | 2930795 - 2931340 | 20689.2 |
| type vi secretion system tip protein vgrg | A7983_RS13320 | Not Available | Positive | 2931878 - 2933845 | 72063.8 |
| duf4123 domain-containing protein | A7983_RS13325 | Not Available | Positive | 2933838 - 2934650 | 31327.7 |
| hypothetical protein | A7983_RS13330 | Not Available | Positive | 2934660 - 2936273 | 59908.6 |
| hypothetical protein | A7983_RS13335 | Not Available | Positive | 2936224 - 2937162 | 35540.7 |
| hypothetical protein | A7983_RS13340 | Not Available | Positive | 2937308 - 2938243 | 35256.4 |
| hypothetical protein | A7983_RS13345 | Not Available | Positive | 2938455 - 2939387 | 35022.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
