Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | A7983_RS12760 | Not Available | Positive | 2818993 - 2819514 | 19338.0 |
| type vi secretion system baseplate subunit tssk | A7983_RS12765 | Not Available | Positive | 2819517 - 2820854 | 49385.9 |
| type ivb secretion system protein icmh/dotu | A7983_RS12770 | Not Available | Positive | 2820870 - 2821646 | 30006.1 |
| type vi secretion system atpase tssh | A7983_RS12775 | Not Available | Positive | 2821660 - 2824257 | 95469.4 |
| sigma-54 interaction domain-containing protein | A7983_RS12780 | Not Available | Positive | 2824260 - 2825798 | 57686.5 |
| type vi secretion system-associated protein vasi | A7983_RS12785 | Not Available | Positive | 2825798 - 2826358 | 20151.0 |
| type vi secretion system protein tssa | A7983_RS12790 | Not Available | Positive | 2826370 - 2827797 | 52514.7 |
| type vi secretion system membrane subunit tssm | A7983_RS12795 | Not Available | Positive | 2827822 - 2831319 | 132519.0 |
| vasl domain-containing protein | A7983_RS12800 | Not Available | Positive | 2831494 - 2832930 | 55021.2 |
| tetratricopeptide repeat protein | A7983_RS12805 | Not Available | Positive | 2832959 - 2834314 | 50027.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
