Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | A7983_RS12260 | Not Available | Negative | 2703826 - 2704758 | 35314.5 |
| gnat family acetyltransferase | A7983_RS12265 | Not Available | Positive | 2704940 - 2705365 | 16337.6 |
| sigma-70 family rna polymerase sigma factor | A7983_RS12270 | Not Available | Positive | 2705505 - 2706026 | 19970.9 |
| fecr family protein | A7983_RS12275 | Not Available | Positive | 2706016 - 2706963 | 35843.4 |
| secretin and tonb n-terminal domain-containing protein | A7983_RS12280 | Not Available | Positive | 2707083 - 2709893 | 105124.0 |
| m16 family metallopeptidase | A7983_RS12285 | Not Available | Positive | 2709919 - 2712696 | 104409.0 |
| abc transporter atp-binding protein/permease | A7983_RS12290 | Not Available | Positive | 2712693 - 2714366 | 63318.9 |
| rpoe-regulated lipoprotein | A7983_RS12295 | Not Available | Positive | 2714679 - 2715296 | 21719.8 |
| dyp-type peroxidase | A7983_RS12300 | Not Available | Positive | 2715467 - 2716366 | 33639.8 |
| sulfate abc transporter substrate-binding protein | A7983_RS12305 | Not Available | Positive | 2716851 - 2717879 | 38074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
