Pectobacterium wasabiae CFBP 3304

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium wasabiae CFBP 3304 is a Gram-negative bacterium characterized by the presence of flagella, which contributes to its motility. This species is notable for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The genome of P. wasabiae CFBP 3304 is accessible through the accession number NZ_CP015750.1, which provides a resource for further genetic and functional studies. As a member of the Pectobacterium genus, P. wasabiae is associated with soft rot diseases in plants, particularly affecting crops such as vegetables. The presence of flagella suggests that P. wasabiae CFBP 3304 can navigate its environment effectively, potentially aiding in its pathogenicity by reaching host tissues. Understanding the motility and genomic characteristics of this bacterium can provide insights into its ecological role, particularly in agricultural settings where it may impact crop yield and quality. The genomic data available may also enable researchers to explore the molecular mechanisms of pathogenicity and resistance, informing strategies for disease management in affected crops. The study of P. wasabiae CFBP 3304 can contribute to a broader understanding of plant-microbe interactions, emphasizing the importance of microbial traits in ecological dynamics and agricultural health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium wasabiae
StrainCFBP 3304

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium wasabiae CFBP 3304 chromosome, complete genome.

Gene Summary

Adenine Count

1247379 bp

Thymine Count

1246330 bp

Guanine Count

1267085 bp

Cytosine Count

1282434 bp

Genome Length

5043228 bp

Protein-coding Genes

4419 genes

Non-Coding Genes

278 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA7983_RS12010Not AvailablePositive2652353 - 265274514327.3
tonb-dependent siderophore receptorA7983_RS12015Not AvailablePositive2653471 - 265586488442.4
bglg family transcription antiterminatorA7983_RS12020Not AvailableNegative2655985 - 265789572830.5
2-dehydro-3-deoxy-phosphogluconate aldolaseA7983_RS12025Not AvailableNegative2657932 - 265866926020.1
dgae family pyridoxal phosphate-dependent ammonia lyaseA7983_RS12030Not AvailableNegative2658666 - 265978440120.0
amidohydrolase/deacetylase family metallohydrolaseA7983_RS12035Not AvailableNegative2659768 - 266090140535.7
duf4310 family proteinA7983_RS12040Not AvailableNegative2660944 - 266158521965.3
duf4311 domain-containing proteinA7983_RS12045Not AvailableNegative2661595 - 266237127089.7
duf4312 family proteinA7983_RS12050Not AvailableNegative2662438 - 266273411151.5
sfcgs family glycine-rich proteinA7983_RS12055Not AvailableNegative2662737 - 266309912537.2

Displaying genes 2611 – 2620 of 4697 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.