Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cse1/casa | A7983_RS10005 | Not Available | Positive | 2210010 - 2211578 | 58411.6 |
| type i-e crispr-associated protein cse2/casb | A7983_RS10010 | Not Available | Positive | 2211562 - 2212209 | 24136.6 |
| type i-e crispr-associated protein cas7/cse4/casc | A7983_RS10015 | Not Available | Positive | 2212213 - 2213280 | 38665.6 |
| type i-e crispr-associated protein cas5/casd | A7983_RS10020 | Not Available | Positive | 2213290 - 2214024 | 27766.8 |
| type i-e crispr-associated protein cas6/cse3/case | A7983_RS10025 | Not Available | Positive | 2214024 - 2214671 | 24419.0 |
| type i-e crispr-associated endonuclease cas1e | A7983_RS10030 | Not Available | Positive | 2214699 - 2215616 | 33199.3 |
| type i-e crispr-associated endoribonuclease cas2e | A7983_RS10035 | Not Available | Positive | 2215617 - 2215910 | 11106.4 |
| helix-turn-helix domain-containing protein | A7983_RS10040 | Not Available | Negative | 2216711 - 2217082 | 14003.6 |
| antibiotic biosynthesis monooxygenase family protein | A7983_RS24415 | Not Available | Negative | 2217156 - 2217416 | 9891.23 |
| type ii toxin-antitoxin system higb family toxin | A7983_RS10045 | Not Available | Positive | 2217687 - 2217998 | 12319.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
