Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium wasabiae |
| Strain | CFBP 3304 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1247379 bp
Thymine Count
1246330 bp
Guanine Count
1267085 bp
Cytosine Count
1282434 bp
Genome Length
5043228 bp
Protein-coding Genes
4419 genes
Non-Coding Genes
278 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele family toxin | A7983_RS09750 | Not Available | Positive | 2152573 - 2152860 | 11125.7 |
| 4,5-dopa dioxygenase extradiol | A7983_RS09755 | Not Available | Positive | 2153039 - 2153824 | 28610.0 |
| glutathionylspermidine synthase family protein | A7983_RS09760 | Not Available | Negative | 2153893 - 2155053 | 44859.9 |
| duf1190 family protein | A7983_RS09765 | Not Available | Negative | 2155065 - 2155733 | 23411.5 |
| outer membrane channel protein tolc | A7983_RS09770 | Not Available | Negative | 2156016 - 2157407 | 50592.0 |
| adp-ribose diphosphatase | A7983_RS09775 | Not Available | Positive | 2157746 - 2158378 | 23643.0 |
| duf1249 family protein | A7983_RS09780 | Not Available | Positive | 2158380 - 2158814 | 17025.8 |
| 3',5'-cyclic-amp phosphodiesterase | A7983_RS09785 | Not Available | Positive | 2159186 - 2160013 | 30892.7 |
| esterase yqia | A7983_RS09790 | Not Available | Positive | 2160013 - 2160594 | 21573.9 |
| dna topoisomerase iv subunit b | A7983_RS09795 | Not Available | Positive | 2160679 - 2162574 | 70137.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
