Serratia inhibens PRI-2C

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia inhibens PRI-2C is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This organism is noted for having a single replicon, indicating a streamlined genetic structure that may enhance its adaptability in various environments. The accession number NZ_CP015613.1 serves as a reference for its genomic sequence, allowing for further research and insight into its genetic makeup and potential applications in microbiology and biotechnology. The presence of flagella not only aids in mobility but may also play a role in colonization and interaction with other microorganisms or surfaces in its ecological niche. Understanding the characteristics of Serratia inhibens PRI-2C is crucial for exploring its ecological roles, particularly in environments where it may interact with other microbial communities. Its Gram-negative nature suggests it possesses an outer membrane that can influence its resistance to certain antibiotics, making it an interesting subject for studies related to antimicrobial resistance. Overall, the traits of Serratia inhibens PRI-2C, including its morphology, motility, and genetic structure, underline its potential significance within microbial ecosystems and highlight the importance of further investigation into its biological functions and interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia inhibens
StrainPRI-2C

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia inhibens PRI-2C
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia inhibens PRI-2C chromosome, complete genome.

Gene Summary

Adenine Count

1214150 bp

Thymine Count

1213661 bp

Guanine Count

1522523 bp

Cytosine Count

1524351 bp

Genome Length

5474685 bp

Protein-coding Genes

4984 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid a hydroxylase lpxoQ5A_RS14925Not AvailableNegative3211405 - 321230735153.4
phosphate starvation-inducible protein phohQ5A_RS14930Not AvailableNegative3212545 - 321333029310.5
tonb-dependent receptor pqquQ5A_RS14935Not AvailableNegative3214050 - 321619778393.6
iron uptake transporter deferrochelatase/peroxidase subunitQ5A_RS14940Not AvailableNegative3216413 - 321771147357.7
iron uptake system protein efeoQ5A_RS14945Not AvailableNegative3217722 - 321885241404.4
iron uptake transporter permease efeuQ5A_RS14950Not AvailableNegative3218871 - 321971630799.2
sodium/proline symporter putpQ5A_RS14955Not AvailableNegative3219968 - 322145253292.2
trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenaseQ5A_RS14960Not AvailablePositive3222009 - 3225980144426.0
type ii toxin-antitoxin system hica family toxinQ5A_RS25690Not AvailablePositive3226147 - 32263297036.8
type ii toxin-antitoxin system hicb family antitoxinQ5A_RS14965Not AvailablePositive3226359 - 322677214945.5

Displaying genes 3071 – 3080 of 5145 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

17 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002131(3S)-hydroxy-3-methylglutaryl-CoAC27H39N7O20P3SChemical structure of (3S)-hydroxy-3-methylglutaryl-CoANot available
Average906.62Da
Monoisotopic906.1183419Da
BASm00026073-methyl-(2E)-butenoyl-CoAC26H38N7O17P3SChemical structure of 3-methyl-(2E)-butenoyl-CoANot available
Average845.61Da
Monoisotopic845.1279693Da
BASm00026093-methyl-(2E)-glutaconyl-CoAC27H37N7O19P3SChemical structure of 3-methyl-(2E)-glutaconyl-CoANot available
Average888.61Da
Monoisotopic888.1105221Da

Displaying 1–10 of 17 metabolites

Health Effects

No health effects information available for this bacterium.