Pseudomonas antarctica strain PAMC 27494

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas antarctica strain PAMC 27494 is characterized by having three replicons, which suggests a complex genomic structure that may contribute to its adaptability in various environments. The strain is associated with three specific accession numbers: NZ_CP015600.1, NZ_CP015601.1, and NZ_CP015602.1. These accession numbers indicate the presence of distinct genomic regions that could be involved in the strain's metabolic pathways and ecological functions. The presence of multiple replicons can enhance the organism's ability to acquire and maintain genetic material that may confer advantages in nutrient utilization, stress resistance, or other ecological interactions. This genomic feature is not uncommon among Pseudomonas species, which are known for their metabolic versatility and ability to thrive in diverse habitats, including extreme conditions. From an ecological perspective, Pseudomonas antarctica strain PAMC 27494 may play a significant role in biogeochemical cycles in its native environment, potentially aiding in nutrient cycling and decomposition processes. The strain's adaptability, as suggested by its genomic configuration, may allow it to occupy various ecological niches, contributing to microbial diversity and ecosystem functioning. Overall, the traits of Pseudomonas antarctica strain PAMC 27494 highlight its potential importance in environmental microbiology and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas antarctica
Strainstrain PAMC 27494

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas antarctica strain PAMC 27494
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas antarctica strain PAMC 27494 chromosome, complete

Gene Summary

Adenine Count

1288199 bp

Thymine Count

1298267 bp

Guanine Count

1927737 bp

Cytosine Count

1927246 bp

Genome Length

6441449 bp

Protein-coding Genes

5627 genes

Non-Coding Genes

366 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis proteinA7J50_RS27410Not AvailableNegative6028911 - 603096272875.1
chemotaxis protein chewA7J50_RS27415Not AvailableNegative6030959 - 603148319307.6
twitching motility response regulator pilhA7J50_RS27420Not AvailableNegative6031496 - 603186113228.0
twitching motility response regulator pilgA7J50_RS27425Not AvailableNegative6031908 - 603231514937.3
glutathione synthaseA7J50_RS27430Not AvailablePositive6032556 - 603350934975.4
energy transducer tonbA7J50_RS27435Not AvailablePositive6033587 - 603449233580.1
yqge/algh family proteinA7J50_RS27440Not AvailablePositive6034560 - 603512920379.3
holliday junction resolvase ruvxA7J50_RS27445Not AvailablePositive6035129 - 603556616169.3
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrA7J50_RS27450Not AvailablePositive6035650 - 603615618300.1
aspartate carbamoyltransferase catalytic subunitA7J50_RS27455Not AvailablePositive6036181 - 603718536163.1

Displaying genes 5601 – 5610 of 6179 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.