Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Flavonifractor
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Flavonifractor |
| Species | Flavonifractor plautii |
| Strain | strain YL31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
746842 bp
Thymine Count
745973 bp
Guanine Count
1166796 bp
Cytosine Count
1158867 bp
Genome Length
3818478 bp
Protein-coding Genes
3605 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | A4U99_RS01775 | Not Available | Positive | 390536 - 390787 | 9986.95 |
| 3-deoxy-7-phosphoheptulonate synthase | A4U99_RS01780 | Not Available | Positive | 391072 - 392091 | 36696.7 |
| 3-dehydroquinate synthase | A4U99_RS01790 | Not Available | Positive | 392612 - 393676 | 37725.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | A4U99_RS01795 | Not Available | Positive | 393673 - 394899 | 43556.0 |
| chorismate synthase | A4U99_RS01800 | Not Available | Positive | 395118 - 396152 | 35935.6 |
| bifunctional chorismate mutase/prephenate dehydratase | A4U99_RS01805 | Not Available | Positive | 396470 - 397627 | 42690.0 |
| shikimate kinase | A4U99_RS01810 | Not Available | Positive | 397624 - 398130 | 18373.0 |
| type ii 3-dehydroquinate dehydratase | A4U99_RS01815 | Not Available | Positive | 398127 - 398582 | 16703.7 |
| alpha/beta fold hydrolase | A4U99_RS01820 | Not Available | Positive | 398575 - 399390 | 30250.4 |
| shikimate dehydrogenase | A4U99_RS01825 | Not Available | Positive | 399387 - 400784 | 49414.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
