Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Flavonifractor
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Flavonifractor |
| Species | Flavonifractor plautii |
| Strain | strain YL31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
746842 bp
Thymine Count
745973 bp
Guanine Count
1166796 bp
Cytosine Count
1158867 bp
Genome Length
3818478 bp
Protein-coding Genes
3605 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer family protein | A4U99_RS01435 | Not Available | Negative | 317418 - 319243 | 66562.4 |
| Trna-arg | Not Available | Not Available | Positive | 319548 - 319624 | Not Available |
| tyrosine recombinase xerc | A4U99_RS01445 | Not Available | Negative | 319813 - 321222 | 53617.6 |
| helix-turn-helix domain-containing protein | A4U99_RS01450 | Not Available | Negative | 321244 - 321450 | 7811.37 |
| type iv secretory system conjugative dna transfer family protein | A4U99_RS01455 | Not Available | Negative | 322004 - 322236 | 8118.02 |
| sigma-70 family rna polymerase sigma factor | A4U99_RS01460 | Not Available | Negative | 322242 - 322673 | 16227.2 |
| cysteine-rich ktr domain-containing protein | A4U99_RS01465 | Not Available | Negative | 323196 - 323381 | 7133.82 |
| yjdf family protein | A4U99_RS01470 | Not Available | Negative | 323383 - 323805 | 16498.9 |
| padr family transcriptional regulator | A4U99_RS01475 | Not Available | Negative | 323802 - 324326 | 19931.8 |
| mate family efflux transporter | A4U99_RS01480 | Not Available | Negative | 324395 - 325771 | 48915.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
