Flavonifractor plautii strain YL31

Gram-positiveRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Flavonifractor

Description

Flavonifractor plautii strain YL31 is a Gram-positive, facultative anaerobic bacterium primarily found in the human gut microbiota. Its rod-shaped morphology is characteristic of many members within the Firmicutes phylum. This particular strain is notable for its singular replicon, indicating a streamlined genomic structure. The strain is associated with human hosts, specifically Homo sapiens, and has been implicated in health effects such as bloodstream infections. This association raises concerns regarding the role of gut microbiota in systemic infections, highlighting the potential for opportunistic pathogenic behavior under certain conditions. Flavonifractor plautii strain YL31 is cataloged under the accession number NZ_CP015406.2, which denotes its genomic sequence in microbial databases. The presence of this strain in the human gut underscores the importance of understanding the complexities of gut microbiota and its contributions to both health and disease. The ability of this bacterium to thrive in the anaerobic environment of the gut while also adapting to oxygen presence exemplifies the versatility of gut microorganisms. In summary, Flavonifractor plautii strain YL31 serves as a pertinent example of how gut microbiota can play dual roles in human health, contributing to both beneficial functions and potential pathogenicity in the bloodstream. This duality emphasizes the need for ongoing research into the dynamics of gut microbiota and its implications for human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusFlavonifractor
SpeciesFlavonifractor plautii
Strainstrain YL31

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavonifractor plautii strain YL31 chromosome, complete genome.

Gene Summary

Adenine Count

746842 bp

Thymine Count

745973 bp

Guanine Count

1166796 bp

Cytosine Count

1158867 bp

Genome Length

3818478 bp

Protein-coding Genes

3605 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette domain-containing proteinA4U99_RS16950Not AvailableNegative3456468 - 345705220673.4
abc transporter permeaseA4U99_RS16955Not AvailableNegative3457049 - 345774124724.9
abc transporter substrate-binding proteinA4U99_RS16960Not AvailableNegative3457821 - 345886136240.9
crp/fnr family transcriptional regulatorA4U99_RS16965Not AvailableNegative3458879 - 345953823869.9
hypothetical proteinA4U99_RS16970Not AvailablePositive3459660 - 345996511021.3
lcp family proteinA4U99_RS16975Not AvailablePositive3460080 - 346112638259.2
prephenate dehydrogenase/arogenate dehydrogenase family proteinA4U99_RS16980Not AvailableNegative3461164 - 346202430902.2
3-deoxy-7-phosphoheptulonate synthaseA4U99_RS16985Not AvailableNegative3462481 - 346349736407.3
rrf2 family transcriptional regulatorA4U99_RS16990Not AvailablePositive3463800 - 346423716132.4
amidohydrolase family proteinA4U99_RS16995Not AvailableNegative3464302 - 346675289040.9

Displaying genes 3411 – 3420 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

269 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 269 metabolites

Health Effects

Health ConditionRelationReference
Bloodstream infectionCausesPMC11196211

Displaying health effects 1 – 1 of 1 in total