Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Flavonifractor
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Flavonifractor |
| Species | Flavonifractor plautii |
| Strain | strain YL31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
746842 bp
Thymine Count
745973 bp
Guanine Count
1166796 bp
Cytosine Count
1158867 bp
Genome Length
3818478 bp
Protein-coding Genes
3605 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | A4U99_RS14580 | Not Available | Positive | 2961543 - 2962013 | 17581.9 |
| hypothetical protein | A4U99_RS18990 | Not Available | Positive | 2962010 - 2962978 | 34235.4 |
| transporter substrate-binding domain-containing protein | A4U99_RS14595 | Not Available | Positive | 2963494 - 2964411 | 31066.2 |
| amino acid abc transporter permease | A4U99_RS14600 | Not Available | Positive | 2964415 - 2965233 | 29958.2 |
| amino acid abc transporter atp-binding protein | A4U99_RS14605 | Not Available | Positive | 2965230 - 2965973 | 27256.1 |
| mate family efflux transporter | A4U99_RS14610 | Not Available | Negative | 2965960 - 2967333 | 48415.4 |
| ribosome hibernation-promoting factor, hpf/yfia family | A4U99_RS14615 | Not Available | Negative | 2967710 - 2968255 | 20694.4 |
| nifb/nifx family molybdenum-iron cluster-binding protein | A4U99_RS19550 | Not Available | Negative | 2968392 - 2968814 | 14169.4 |
| duf134 domain-containing protein | A4U99_RS19555 | Not Available | Negative | 2968827 - 2969210 | 13938.9 |
| hypothetical protein | A4U99_RS14630 | Not Available | Positive | 2969501 - 2969749 | 9372.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
