Flavonifractor plautii strain YL31

Gram-positiveRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Flavonifractor

Description

Flavonifractor plautii strain YL31 is a Gram-positive, facultative anaerobic bacterium primarily found in the human gut microbiota. Its rod-shaped morphology is characteristic of many members within the Firmicutes phylum. This particular strain is notable for its singular replicon, indicating a streamlined genomic structure. The strain is associated with human hosts, specifically Homo sapiens, and has been implicated in health effects such as bloodstream infections. This association raises concerns regarding the role of gut microbiota in systemic infections, highlighting the potential for opportunistic pathogenic behavior under certain conditions. Flavonifractor plautii strain YL31 is cataloged under the accession number NZ_CP015406.2, which denotes its genomic sequence in microbial databases. The presence of this strain in the human gut underscores the importance of understanding the complexities of gut microbiota and its contributions to both health and disease. The ability of this bacterium to thrive in the anaerobic environment of the gut while also adapting to oxygen presence exemplifies the versatility of gut microorganisms. In summary, Flavonifractor plautii strain YL31 serves as a pertinent example of how gut microbiota can play dual roles in human health, contributing to both beneficial functions and potential pathogenicity in the bloodstream. This duality emphasizes the need for ongoing research into the dynamics of gut microbiota and its implications for human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusFlavonifractor
SpeciesFlavonifractor plautii
Strainstrain YL31

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavonifractor plautii strain YL31 chromosome, complete genome.

Gene Summary

Adenine Count

746842 bp

Thymine Count

745973 bp

Guanine Count

1166796 bp

Cytosine Count

1158867 bp

Genome Length

3818478 bp

Protein-coding Genes

3605 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcA4U99_RS14220Not AvailablePositive2877788 - 28780759975.89
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataA4U99_RS14225Not AvailablePositive2878084 - 287954450479.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbA4U99_RS14230Not AvailablePositive2879541 - 288096252356.6
psts family phosphate abc transporter substrate-binding proteinA4U99_RS14235Not AvailableNegative2881029 - 288323379235.3
mate family efflux transporterA4U99_RS14240Not AvailablePositive2883520 - 288485446277.2
gnat family n-acetyltransferaseA4U99_RS14245Not AvailableNegative2884827 - 288534519970.7
o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family proteinA4U99_RS14250Not AvailableNegative2885411 - 288669446009.5
germn domain-containing proteinA4U99_RS14255Not AvailableNegative2886757 - 288728418606.0
cell wall metabolism sensor histidine kinase walkA4U99_RS14260Not AvailableNegative2887281 - 288874153298.0
response regulator transcription factorA4U99_RS14265Not AvailableNegative2888734 - 288942025763.2

Displaying genes 2921 – 2930 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

269 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 269 metabolites

Health Effects

Health ConditionRelationReference
Bloodstream infectionCausesPMC11196211

Displaying health effects 1 – 1 of 1 in total