Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Flavonifractor
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Flavonifractor |
| Species | Flavonifractor plautii |
| Strain | strain YL31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
746842 bp
Thymine Count
745973 bp
Guanine Count
1166796 bp
Cytosine Count
1158867 bp
Genome Length
3818478 bp
Protein-coding Genes
3605 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | A4U99_RS11070 | Not Available | Negative | 2240485 - 2240682 | 7652.17 |
| sigma factor-like helix-turn-helix dna-binding protein | A4U99_RS11075 | Not Available | Negative | 2240675 - 2241097 | 16395.7 |
| hypothetical protein | A4U99_RS11080 | Not Available | Negative | 2241245 - 2241526 | 10803.0 |
| sensor histidine kinase kdpd | A4U99_RS11085 | Not Available | Negative | 2241653 - 2243023 | 51516.9 |
| response regulator transcription factor | A4U99_RS11090 | Not Available | Negative | 2243020 - 2243715 | 26059.8 |
| abc transporter atp-binding protein | A4U99_RS11095 | Not Available | Positive | 2243874 - 2244797 | 34222.6 |
| abc transporter permease | A4U99_RS11100 | Not Available | Positive | 2244781 - 2245593 | 30168.4 |
| abc transporter permease | A4U99_RS11105 | Not Available | Positive | 2245595 - 2246365 | 28733.6 |
| yxea family protein | A4U99_RS11110 | Not Available | Positive | 2246386 - 2246733 | 12899.5 |
| rna polymerase sigma factor | A4U99_RS11115 | Not Available | Positive | 2247230 - 2247652 | 16515.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
