Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Flavonifractor
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Flavonifractor |
| Species | Flavonifractor plautii |
| Strain | strain YL31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut microbiota |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
746842 bp
Thymine Count
745973 bp
Guanine Count
1166796 bp
Cytosine Count
1158867 bp
Genome Length
3818478 bp
Protein-coding Genes
3605 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m42 family peptidase | A4U99_RS09625 | Not Available | Negative | 1954910 - 1955926 | 36078.7 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | A4U99_RS09630 | Not Available | Negative | 1956003 - 1957391 | 50428.6 |
| type iv secretory system conjugative dna transfer family protein | A4U99_RS09635 | Not Available | Positive | 1957549 - 1958025 | 18041.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1958078 - 1958427 | Not Available |
| yebc/pmpr family dna-binding transcriptional regulator | A4U99_RS09645 | Not Available | Negative | 1958608 - 1959336 | 26691.1 |
| nif3-like dinuclear metal center hexameric protein | A4U99_RS09650 | Not Available | Negative | 1959411 - 1960208 | 28156.8 |
| class i sam-dependent methyltransferase | A4U99_RS09655 | Not Available | Negative | 1960196 - 1960909 | 26565.1 |
| duf1858 domain-containing protein | A4U99_RS09660 | Not Available | Negative | 1960974 - 1961180 | 7109.67 |
| zinc-ribbon domain containing protein | A4U99_RS09665 | Not Available | Negative | 1961319 - 1961597 | 10441.2 |
| sigma-70 family rna polymerase sigma factor | A4U99_RS09670 | Not Available | Negative | 1961669 - 1962304 | 23664.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
